Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux rnd transporter permease subunit | DXA69_11005 | Not Available | Positive | 2665378 - 2668494 | 112598.0 |
| mechanosensitive ion channel family protein | DXA69_11010 | Not Available | Positive | 2668636 - 2669829 | 45236.8 |
| sensor histidine kinase | DXA69_11015 | Not Available | Negative | 2669946 - 2671442 | 56725.8 |
| tonb-dependent receptor | DXA69_11020 | Not Available | Positive | 2671597 - 2673921 | 88569.2 |
| duf1232 domain-containing protein | DXA69_11025 | Not Available | Positive | 2674066 - 2674428 | 14004.2 |
| tonb-dependent receptor | DXA69_11030 | Not Available | Positive | 2674983 - 2678228 | 119645.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_11035 | Not Available | Positive | 2678243 - 2679733 | 55950.7 |
| methylmalonyl-coa mutase | DXA69_11040 | Not Available | Negative | 2680058 - 2682208 | 79110.7 |
| methylmalonyl-coa mutase small subunit | DXA69_11045 | Not Available | Negative | 2682218 - 2684128 | 70688.7 |
| putative transporter | DXA69_11050 | Not Available | Positive | 2684415 - 2686085 | 60143.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

