Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine exporter lyso family protein | DXA69_10100 | Not Available | Negative | 2436739 - 2437341 | 21649.9 |
| duf340 domain-containing protein | DXA69_10105 | Not Available | Negative | 2437338 - 2437619 | 10217.2 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_10110 | Not Available | Negative | 2437734 - 2439251 | 57946.4 |
| tonb-dependent receptor | DXA69_10115 | Not Available | Negative | 2439272 - 2442400 | 116596.0 |
| tetratricopeptide repeat protein | DXA69_10120 | Not Available | Negative | 2442624 - 2444249 | 63071.9 |
| ribonuclease hii | DXA69_10125 | Not Available | Positive | 2444351 - 2444956 | 22884.4 |
| l-fucose:h+ symporter permease | DXA69_10130 | Not Available | Negative | 2445099 - 2446412 | 48513.5 |
| l-fucose isomerase | DXA69_10135 | Not Available | Negative | 2446524 - 2448299 | 65624.0 |
| gntr family transcriptional regulator | DXA69_10140 | Not Available | Negative | 2448335 - 2449315 | 38097.8 |
| hypothetical protein | DXA69_10145 | Not Available | Negative | 2449491 - 2449697 | 7540.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

