Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain OF04-10BH
Accession NumberQSCE00000000.1
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s21 | DXA69_00905 | Not Available | - | 216317 - 216508 | 7526.36 |
| aminopeptidase p family protein | DXA69_00910 | Not Available | + | 216677 - 218458 | 66778.9 |
| gamma carbonic anhydrase family protein | DXA69_00915 | Not Available | + | 218468 - 218992 | 18504.4 |
| porin family protein | DXA69_00920 | Not Available | + | 219038 - 219529 | 18089.7 |
| gnat family n-acetyltransferase | DXA69_00925 | Not Available | + | 219644 - 220600 | 36877.2 |
| dna-binding response regulator | DXA69_00930 | Not Available | - | 220651 - 221352 | 26452.2 |
| sensor histidine kinase | DXA69_00935 | Not Available | - | 221378 - 222763 | 53539.9 |
| hypothetical protein | DXA69_00940 | Not Available | + | 222885 - 225182 | 87632.9 |
| pdz domain-containing protein | DXA69_00945 | Not Available | - | 225248 - 226942 | 63116.7 |
| adenosine kinase | DXA69_00950 | Not Available | - | 226986 - 227972 | 35367.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
