Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA69_09285 | Not Available | Positive | 2256957 - 2257178 | 8371.13 |
| duf4286 family protein | DXA69_09290 | Not Available | Positive | 2257732 - 2258037 | 11955.3 |
| crossover junction endodeoxyribonuclease ruvc | DXA69_09295 | Not Available | Positive | 2258034 - 2258603 | 21117.3 |
| type i pullulanase | DXA69_09300 | Not Available | Positive | 2258608 - 2260602 | 74595.6 |
| mannonate dehydratase | DXA69_09305 | Not Available | Positive | 2260663 - 2261841 | 44692.7 |
| patatin | DXA69_09310 | Not Available | Negative | 2261824 - 2264034 | 81864.5 |
| exonuclease | DXA69_09315 | Not Available | Positive | 2264242 - 2264730 | 18689.0 |
| yigz family protein | DXA69_09320 | Not Available | Positive | 2264767 - 2265366 | 22666.4 |
| porin | DXA69_09325 | Not Available | Positive | 2265558 - 2266571 | 38637.0 |
| excinuclease abc subunit uvrb | DXA69_09330 | Not Available | Negative | 2266650 - 2268683 | 77662.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

