Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA69_08100 | Not Available | Negative | 2029838 - 2031205 | 49212.4 |
| hypothetical protein | DXA69_08105 | Not Available | Positive | 2031462 - 2031710 | 9652.1 |
| mate family efflux transporter | DXA69_08110 | Not Available | Positive | 2031810 - 2033132 | 48822.5 |
| signal recognition particle protein | DXA69_08115 | Not Available | Positive | 2033231 - 2034553 | 48898.8 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | DXA69_08120 | Not Available | Positive | 2034672 - 2035553 | 31614.8 |
| capa family protein | DXA69_08125 | Not Available | Positive | 2036491 - 2037564 | 40961.7 |
| Trna-his | Not Available | Not Available | Positive | 2037640 - 2037713 | Not Available |
| sigma-70 family rna polymerase sigma factor | DXA69_08135 | Not Available | Positive | 2037793 - 2038359 | 22678.5 |
| fecr family protein | DXA69_08140 | Not Available | Positive | 2038432 - 2039511 | 41318.0 |
| susc/raga family tonb-linked outer membrane protein | DXA69_08145 | Not Available | Positive | 2039569 - 2043063 | 130495.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

