Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DXA69_07470 | Not Available | Positive | 1882110 - 1883081 | 34884.6 |
| duf2089 family protein | DXA69_07475 | Not Available | Positive | 1883083 - 1883364 | 10336.8 |
| hypothetical protein | DXA69_07480 | Not Available | Positive | 1883364 - 1883558 | 6934.73 |
| prephenate dehydrogenase/arogenate dehydrogenase family protein | DXA69_07485 | Not Available | Negative | 1883621 - 1884394 | 29349.4 |
| 3-deoxy-7-phosphoheptulonate synthase | DXA69_07490 | Not Available | Negative | 1884399 - 1885466 | 39926.6 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DXA69_07495 | Not Available | Negative | 1885486 - 1886670 | 45007.1 |
| prephenate dehydratase | DXA69_07500 | Not Available | Negative | 1886645 - 1887487 | 31796.2 |
| transcriptional regulator | DXA69_07505 | Not Available | Negative | 1887746 - 1888102 | 13441.4 |
| protease | DXA69_07510 | Not Available | Positive | 1888292 - 1888822 | 18952.9 |
| pyridoxal phosphate-dependent aminotransferase | DXA69_07515 | Not Available | Positive | 1888889 - 1890064 | 44675.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

