Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acylglucosamine 2-epimerase | DXA69_06920 | Not Available | Negative | 1741101 - 1742297 | 46198.0 |
| n-acetylneuraminate lyase | DXA69_06925 | Not Available | Negative | 1742310 - 1743224 | 33910.9 |
| rok family transcriptional regulator | DXA69_06930 | Not Available | Positive | 1743530 - 1744735 | 44586.1 |
| sigma-70 family rna polymerase sigma factor | DXA69_06935 | Not Available | Positive | 1744850 - 1745485 | 24978.3 |
| duf4974 domain-containing protein | DXA69_06940 | Not Available | Positive | 1745693 - 1746775 | 41255.3 |
| susc/raga family tonb-linked outer membrane protein | DXA69_06945 | Not Available | Positive | 1746924 - 1750661 | 139624.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_06950 | Not Available | Positive | 1750677 - 1752266 | 60862.9 |
| hypothetical protein | DXA69_06955 | Not Available | Positive | 1752279 - 1753523 | 47281.9 |
| had family hydrolase | DXA69_06960 | Not Available | Negative | 1753636 - 1754370 | 27061.4 |
| glucose-6-phosphate isomerase | DXA69_06965 | Not Available | Negative | 1754522 - 1755865 | 48991.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

