Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | DXA69_06660 | Not Available | Negative | 1666380 - 1667207 | 31175.8 |
| xre family transcriptional regulator | DXA69_06665 | Not Available | Positive | 1667331 - 1667540 | 8031.9 |
| sam-dependent dna methyltransferase | DXA69_06675 | Not Available | Positive | 1670337 - 1671755 | 53138.6 |
| restriction endonuclease subunit s | DXA69_06685 | Not Available | Positive | 1673078 - 1674397 | 49762.0 |
| integrase | DXA69_06690 | Not Available | Negative | 1674428 - 1675231 | 31442.2 |
| restriction endonuclease subunit s | DXA69_06695 | Not Available | Positive | 1675268 - 1675822 | 20716.2 |
| type i restriction endonuclease | DXA69_06700 | Not Available | Negative | 1675817 - 1677217 | 53527.5 |
| cell surface protein | DXA69_06705 | Not Available | Positive | 1679100 - 1681931 | 98105.0 |
| pqqd family protein | DXA69_06710 | Not Available | Positive | 1682044 - 1682313 | 10042.2 |
| hypothetical protein | DXA69_06715 | Not Available | Positive | 1682351 - 1683436 | 41345.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

