Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endo-1,4-beta-xylanase | DXA69_06385 | Not Available | Positive | 1593734 - 1594861 | 42154.6 |
| alpha-n-arabinofuranosidase | DXA69_06390 | Not Available | Positive | 1594874 - 1595845 | 36790.1 |
| glycoside hydrolase family 43 protein | DXA69_06395 | Not Available | Positive | 1596195 - 1597931 | 64728.6 |
| tonb-dependent receptor | DXA69_06400 | Not Available | Positive | 1597973 - 1601044 | 113079.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_06405 | Not Available | Positive | 1601059 - 1602993 | 71559.0 |
| hypothetical protein | DXA69_06410 | Not Available | Positive | 1602998 - 1603183 | 7382.18 |
| response regulator | DXA69_06415 | Not Available | Negative | 1603620 - 1607672 | 154782.0 |
| hypothetical protein | DXA69_06420 | Not Available | Negative | 1607694 - 1607885 | 7005.76 |
| glycoside hydrolase | DXA69_06425 | Not Available | Positive | 1608048 - 1609631 | 60270.7 |
| glycosyhydrolase | DXA69_06430 | Not Available | Positive | 1609644 - 1612238 | 99344.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

