Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein tram | DXA69_06235 | Not Available | Negative | 1549004 - 1550353 | 48610.3 |
| duf3989 domain-containing protein | DXA69_06240 | Not Available | Negative | 1550304 - 1550621 | 12369.7 |
| conjugative transposon protein trak | DXA69_06245 | Not Available | Negative | 1550626 - 1551249 | 23944.7 |
| conjugative transposon protein traj | DXA69_06250 | Not Available | Negative | 1551255 - 1552328 | 39225.3 |
| hypothetical protein | DXA69_06255 | Not Available | Negative | 1552348 - 1552771 | 16441.9 |
| transglutaminase domain-containing protein | DXA69_06260 | Not Available | Positive | 1552772 - 1553349 | 22166.6 |
| o-antigen ligase domain-containing protein | DXA69_06265 | Not Available | Positive | 1553352 - 1555001 | 62407.8 |
| efflux rnd transporter periplasmic adaptor subunit | DXA69_06270 | Not Available | Positive | 1555054 - 1556121 | 39210.3 |
| acrb/acrd/acrf family protein | DXA69_06275 | Not Available | Positive | 1556126 - 1559206 | 115269.0 |
| tolc family protein | DXA69_06280 | Not Available | Positive | 1559193 - 1560677 | 56784.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

