Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta | DXA69_06120 | Not Available | Negative | 1521058 - 1522182 | 43505.0 |
| methylenetetrahydrofolate reductase | DXA69_06125 | Not Available | Negative | 1522210 - 1523163 | 36139.4 |
| cardiolipin synthase | DXA69_06130 | Not Available | Negative | 1523520 - 1524815 | 49643.3 |
| Trna-lys | Not Available | Not Available | Positive | 1525888 - 1525963 | Not Available |
| ai-2e family transporter | DXA69_06145 | Not Available | Negative | 1526055 - 1527191 | 42807.2 |
| thymidine kinase | DXA69_06150 | Not Available | Negative | 1527202 - 1527801 | 22362.8 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | DXA69_06155 | Not Available | Positive | 1528007 - 1528681 | 25002.3 |
| hypothetical protein | DXA69_06160 | Not Available | Positive | 1528710 - 1529558 | 31531.5 |
| noncanonical pyrimidine nucleotidase, yjjg family | DXA69_06165 | Not Available | Positive | 1529635 - 1530324 | 26986.8 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_06170 | Not Available | Negative | 1530539 - 1532080 | 57972.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

