Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DXA69_05970 | Not Available | Positive | 1467299 - 1469335 | 75018.6 |
| xylan 1,4-beta-xylosidase | DXA69_05975 | Not Available | Positive | 1469345 - 1470844 | 56550.8 |
| duf5060 domain-containing protein | DXA69_05980 | Not Available | Positive | 1470882 - 1472489 | 61917.4 |
| hypothetical protein | DXA69_05985 | Not Available | Positive | 1472682 - 1475228 | 94969.9 |
| carbohydrate esterase | DXA69_05990 | Not Available | Positive | 1475291 - 1476811 | 55696.4 |
| rna polymerase sigma-70 factor | DXA69_05995 | Not Available | Positive | 1476876 - 1477439 | 22502.1 |
| fecr family protein | DXA69_06000 | Not Available | Positive | 1477510 - 1478442 | 35856.4 |
| susc/raga family tonb-linked outer membrane protein | DXA69_06005 | Not Available | Positive | 1478498 - 1481797 | 122167.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_06010 | Not Available | Positive | 1481816 - 1483504 | 64201.7 |
| beta-glycosidase | DXA69_06015 | Not Available | Positive | 1483590 - 1486625 | 114688.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

