Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1573 domain-containing protein | DXA69_05485 | Not Available | Positive | 1332585 - 1332842 | 9624.45 |
| rna polymerase sigma-70 factor | DXA69_05490 | Not Available | Positive | 1332937 - 1333524 | 22834.5 |
| duf4974 domain-containing protein | DXA69_05495 | Not Available | Positive | 1333643 - 1334587 | 35874.2 |
| susc/raga family tonb-linked outer membrane protein | DXA69_05500 | Not Available | Positive | 1334743 - 1338096 | 124278.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_05505 | Not Available | Positive | 1338115 - 1339677 | 60395.9 |
| glycoside hydrolase family 28 protein | DXA69_05510 | Not Available | Positive | 1339754 - 1341325 | 58869.0 |
| glycoside hydrolase family 2 protein | DXA69_05515 | Not Available | Positive | 1341322 - 1343391 | 78999.5 |
| sialate o-acetylesterase | DXA69_05520 | Not Available | Positive | 1343467 - 1344885 | 52946.9 |
| alpha-galactosidase | DXA69_05525 | Not Available | Positive | 1345262 - 1346878 | 60978.4 |
| sgnh/gdsl hydrolase family protein | DXA69_05530 | Not Available | Positive | 1346884 - 1347756 | 32978.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

