Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gscfa domain protein | DXA69_05380 | Not Available | Positive | 1296915 - 1297901 | 38511.4 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | DXA69_05385 | Not Available | Positive | 1297877 - 1300342 | 92734.8 |
| duf4858 domain-containing protein | DXA69_05390 | Not Available | Positive | 1300432 - 1300995 | 21513.1 |
| exopolygalacturonase | DXA69_05395 | Not Available | Negative | 1301147 - 1302451 | 49169.9 |
| beta-galactosidase | DXA69_05400 | Not Available | Negative | 1302486 - 1305398 | 109910.0 |
| glycoside hydrolase family 28 protein | DXA69_05405 | Not Available | Negative | 1305496 - 1306989 | 55564.1 |
| hypothetical protein | DXA69_05410 | Not Available | Positive | 1308466 - 1309161 | 26789.0 |
| duf229 domain-containing protein | DXA69_05415 | Not Available | Negative | 1309365 - 1310762 | 53407.7 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_05420 | Not Available | Negative | 1310803 - 1312605 | 69749.6 |
| susc/raga family tonb-linked outer membrane protein | DXA69_05425 | Not Available | Negative | 1312620 - 1316027 | 127333.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

