Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3853 family protein | DXA69_05230 | Not Available | Negative | 1258245 - 1258553 | 11343.9 |
| hypothetical protein | DXA69_05235 | Not Available | Negative | 1258775 - 1259800 | 40193.8 |
| site-specific integrase | DXA69_05240 | Not Available | Negative | 1259803 - 1261095 | 50462.9 |
| alpha-l-fucosidase | DXA69_05245 | Not Available | Negative | 1261445 - 1262770 | 50401.0 |
| gtp-binding protein | DXA69_05250 | Not Available | Positive | 1262920 - 1264143 | 46659.1 |
| beta-xylosidase | DXA69_05255 | Not Available | Negative | 1264215 - 1267082 | 108200.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_05260 | Not Available | Negative | 1267099 - 1268817 | 64244.0 |
| tonb-dependent receptor | DXA69_05265 | Not Available | Negative | 1268830 - 1272078 | 120417.0 |
| response regulator | DXA69_05270 | Not Available | Positive | 1272176 - 1276648 | 171899.0 |
| glycoside hydrolase family 28 protein | DXA69_05275 | Not Available | Negative | 1276726 - 1278132 | 52455.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

