Agathobacter rectalis strain AF06-19

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain AF06-19 is a Gram-positive, rod-shaped bacterium classified as a chemoheterotroph, meaning it derives its energy from organic compounds. This strain is an anaerobe, thriving in environments devoid of oxygen, and is known to be free-living, indicating it does not rely on a host for survival, although it is associated with Homo sapiens. The optimal growth temperature for A. rectalis strain AF06-19 is 37°C, which falls within the mesophilic temperature range. This suggests that the organism is well-adapted to the human body temperature, potentially playing a role in human gastrointestinal microbiota. A. rectalis strain AF06-19 has a single replicon and one membrane, indicating a relatively simple cellular organization. It is nonsporulating, which means it does not form spores to survive adverse conditions. The strain is non-motile and possesses flagella, though its lack of mobility suggests that it relies on other means for dispersal within its habitat. The presence of A. rectalis in various habitats, particularly within the human gut, highlights its potential ecological role in maintaining gut health and contributing to the complex microbial community. Its ability to utilize organic compounds may be significant in nutrient cycling and interaction with other gut microbiota, emphasizing its importance in the broader ecological context of the gastrointestinal environment.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain AF06-19

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain AF06-19
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain AF06-19 AF06-19.Scaf45, whole genome

Gene Summary

Adenine Count

970792 bp

Thymine Count

968786 bp

Guanine Count

669380 bp

Cytosine Count

683090 bp

Genome Length

3292516 bp

Protein-coding Genes

2982 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDWV45_02850Not AvailablePositive642784 - 64358729775.8
atpaseDWV45_02855Not AvailableNegative643567 - 64422324146.8
pantetheine-phosphate adenylyltransferaseDWV45_02860Not AvailableNegative644237 - 64472218097.9
16s rrna (guanine(966)-n(2))-methyltransferase rsmdDWV45_02865Not AvailableNegative644733 - 64528420698.9
cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseDWV45_02870Not AvailableNegative645305 - 64585320502.2
30s ribosomal protein s12 methylthiotransferase rimoDWV45_02875Not AvailableNegative645850 - 64717550372.5
dna-directed rna polymerase subunit omegaDWV45_02880Not AvailableNegative647241 - 6475019463.31
guanylate kinaseDWV45_02885Not AvailableNegative647503 - 64816224651.2
yicc family proteinDWV45_02890Not AvailableNegative648178 - 64919739753.5
fibronectin/fibrinogen-binding proteinDWV45_02895Not AvailablePositive649196 - 65093865391.9

Displaying genes 671 – 680 of 3124 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.