Agathobacter rectalis strain AF06-19

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain AF06-19 is a Gram-positive, rod-shaped bacterium classified as a chemoheterotroph, meaning it derives its energy from organic compounds. This strain is an anaerobe, thriving in environments devoid of oxygen, and is known to be free-living, indicating it does not rely on a host for survival, although it is associated with Homo sapiens. The optimal growth temperature for A. rectalis strain AF06-19 is 37°C, which falls within the mesophilic temperature range. This suggests that the organism is well-adapted to the human body temperature, potentially playing a role in human gastrointestinal microbiota. A. rectalis strain AF06-19 has a single replicon and one membrane, indicating a relatively simple cellular organization. It is nonsporulating, which means it does not form spores to survive adverse conditions. The strain is non-motile and possesses flagella, though its lack of mobility suggests that it relies on other means for dispersal within its habitat. The presence of A. rectalis in various habitats, particularly within the human gut, highlights its potential ecological role in maintaining gut health and contributing to the complex microbial community. Its ability to utilize organic compounds may be significant in nutrient cycling and interaction with other gut microbiota, emphasizing its importance in the broader ecological context of the gastrointestinal environment.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain AF06-19

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain AF06-19
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain AF06-19 AF06-19.Scaf45, whole genome

Gene Summary

Adenine Count

970792 bp

Thymine Count

968786 bp

Guanine Count

669380 bp

Cytosine Count

683090 bp

Genome Length

3292516 bp

Protein-coding Genes

2982 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
act domain-containing proteinDWV45_11280Not AvailablePositive2361902 - 236234516260.6
homoserine dehydrogenaseDWV45_11285Not AvailablePositive2362353 - 236354343168.6
flagellar hook-basal body proteinDWV45_11290Not AvailablePositive2363555 - 236435528774.5
flagellar hook-basal body proteinDWV45_11295Not AvailablePositive2364369 - 236518728966.8
hypothetical proteinDWV45_11300Not AvailablePositive2365194 - 236553812992.0
atp-dependent recd-like dna helicaseDWV45_11305Not AvailablePositive2365693 - 236791883815.9
gnat family n-acetyltransferaseDWV45_11310Not AvailablePositive2367918 - 236851422324.2
carbamoyl phosphate synthase small subunitDWV45_11315Not AvailablePositive2368794 - 236986439148.8
carbamoyl-phosphate synthase large subunitDWV45_11320Not AvailablePositive2369864 - 2373070117539.0
acetyl-coa c-acetyltransferaseDWV45_11325Not AvailablePositive2373393 - 237457740842.8

Displaying genes 2241 – 2250 of 3124 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.