Agathobacter rectalis strain AF06-19

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain AF06-19 is a Gram-positive, rod-shaped bacterium classified as a chemoheterotroph, meaning it derives its energy from organic compounds. This strain is an anaerobe, thriving in environments devoid of oxygen, and is known to be free-living, indicating it does not rely on a host for survival, although it is associated with Homo sapiens. The optimal growth temperature for A. rectalis strain AF06-19 is 37°C, which falls within the mesophilic temperature range. This suggests that the organism is well-adapted to the human body temperature, potentially playing a role in human gastrointestinal microbiota. A. rectalis strain AF06-19 has a single replicon and one membrane, indicating a relatively simple cellular organization. It is nonsporulating, which means it does not form spores to survive adverse conditions. The strain is non-motile and possesses flagella, though its lack of mobility suggests that it relies on other means for dispersal within its habitat. The presence of A. rectalis in various habitats, particularly within the human gut, highlights its potential ecological role in maintaining gut health and contributing to the complex microbial community. Its ability to utilize organic compounds may be significant in nutrient cycling and interaction with other gut microbiota, emphasizing its importance in the broader ecological context of the gastrointestinal environment.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain AF06-19

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain AF06-19
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain AF06-19 AF06-19.Scaf45, whole genome

Gene Summary

Adenine Count

970792 bp

Thymine Count

968786 bp

Guanine Count

669380 bp

Cytosine Count

683090 bp

Genome Length

3292516 bp

Protein-coding Genes

2982 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sporulation transcription factor spo0aDWV45_06740Not AvailableNegative1436106 - 143665420348.6
abc transporter atp-binding proteinDWV45_06745Not AvailableNegative1436817 - 143867068441.2
abc transporter atp-binding proteinDWV45_06750Not AvailableNegative1438672 - 144084979495.4
duf5057 domain-containing proteinDWV45_06755Not AvailableNegative1441073 - 1446157190031.0
type ii secretion system proteinDWV45_06760Not AvailableNegative1446190 - 144767454503.9
type ii secretion system proteinDWV45_06765Not AvailableNegative1447759 - 144826818513.3
hypothetical proteinDWV45_06770Not AvailableNegative1448356 - 145067483316.2
prepilin-type n-terminal cleavage/methylation domain-containing proteinDWV45_06775Not AvailableNegative1450677 - 145206251248.3
pilus assembly protein piloDWV45_06780Not AvailableNegative1452182 - 145298828439.8
pilus assembly protein pilmDWV45_06785Not AvailableNegative1453000 - 145489568385.6

Displaying genes 1371 – 1380 of 3124 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.