Agathobacter rectalis strain AF06-19

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain AF06-19 is a Gram-positive, rod-shaped bacterium classified as a chemoheterotroph, meaning it derives its energy from organic compounds. This strain is an anaerobe, thriving in environments devoid of oxygen, and is known to be free-living, indicating it does not rely on a host for survival, although it is associated with Homo sapiens. The optimal growth temperature for A. rectalis strain AF06-19 is 37°C, which falls within the mesophilic temperature range. This suggests that the organism is well-adapted to the human body temperature, potentially playing a role in human gastrointestinal microbiota. A. rectalis strain AF06-19 has a single replicon and one membrane, indicating a relatively simple cellular organization. It is nonsporulating, which means it does not form spores to survive adverse conditions. The strain is non-motile and possesses flagella, though its lack of mobility suggests that it relies on other means for dispersal within its habitat. The presence of A. rectalis in various habitats, particularly within the human gut, highlights its potential ecological role in maintaining gut health and contributing to the complex microbial community. Its ability to utilize organic compounds may be significant in nutrient cycling and interaction with other gut microbiota, emphasizing its importance in the broader ecological context of the gastrointestinal environment.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
Strainstrain AF06-19

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis strain AF06-19
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain AF06-19 AF06-19.Scaf45, whole genome

Gene Summary

Adenine Count

970792 bp

Thymine Count

968786 bp

Guanine Count

669380 bp

Cytosine Count

683090 bp

Genome Length

3292516 bp

Protein-coding Genes

2982 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sensor histidine kinaseDWV45_06270Not AvailablePositive1330922 - 133212446036.6
nucleoid-structuring protein h-nsDWV45_06275Not AvailableNegative1332185 - 133315636087.1
phospho-n-acetylmuramoyl-pentapeptide- transferaseDWV45_06280Not AvailablePositive1333364 - 133432634815.8
laci family transcriptional regulatorDWV45_06285Not AvailableNegative1334393 - 133538836896.8
beta-galactosidaseDWV45_06290Not AvailablePositive1335694 - 133768276211.9
phosphatase pap2 family proteinDWV45_06295Not AvailablePositive1337854 - 133855227566.8
hypothetical proteinDWV45_06300Not AvailableNegative1338670 - 133962035185.1
single-stranded-dna-specific exonuclease recjDWV45_06305Not AvailableNegative1339663 - 134142365569.0
trna pseudouridine(38-40) synthase truaDWV45_06310Not AvailableNegative1341404 - 134216828503.1
carboxypeptidase regulatory-like domain-containing proteinDWV45_06315Not AvailableNegative1342281 - 134354346601.0

Displaying genes 1281 – 1290 of 3124 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.