Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | DWV56_04965 | Not Available | Positive | 1000001 - 1001344 | 48776.0 |
| laci family dna-binding transcriptional regulator | DWV56_04970 | Not Available | Negative | 1001634 - 1002854 | 47382.1 |
| prd domain-containing protein | DWV56_04975 | Not Available | Positive | 1002912 - 1005611 | 103440.0 |
| hypothetical protein | DWV56_04980 | Not Available | Positive | 1005711 - 1006124 | 14720.6 |
| pts mannose/fructose/sorbose transporter subunit iib | DWV56_04985 | Not Available | Positive | 1006140 - 1006607 | 16957.9 |
| pts sugar transporter subunit iic | DWV56_04990 | Not Available | Positive | 1006629 - 1007396 | 26781.6 |
| pts system mannose/fructose/sorbose family transporter subunit iid | DWV56_04995 | Not Available | Positive | 1007377 - 1008204 | 29898.4 |
| sis domain-containing protein | DWV56_05000 | Not Available | Positive | 1008228 - 1009223 | 37848.6 |
| sugar phosphate isomerase/epimerase | DWV56_05005 | Not Available | Positive | 1009537 - 1010367 | 32189.0 |
| had family phosphatase | DWV56_05010 | Not Available | Positive | 1010569 - 1011279 | 27189.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
