Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class c sortase | DWV56_04805 | Not Available | Positive | 966097 - 966906 | 29755.0 |
| cna b-type domain-containing protein | DWV56_04810 | Not Available | Positive | 966910 - 967740 | 31051.1 |
| sortase | DWV56_04815 | Not Available | Positive | 967730 - 968308 | 21756.1 |
| hypothetical protein | DWV56_04820 | Not Available | Positive | 968400 - 969254 | 33967.5 |
| abi family protein | DWV56_04825 | Not Available | Negative | 969858 - 970874 | 40137.4 |
| hypothetical protein | DWV56_04830 | Not Available | Positive | 971188 - 971715 | 20345.2 |
| atp-binding protein | DWV56_04835 | Not Available | Positive | 972110 - 973189 | 41735.9 |
| trk system potassium transporter trka | DWV56_04840 | Not Available | Positive | 973309 - 974667 | 49895.9 |
| trkh family potassium uptake protein | DWV56_04845 | Not Available | Positive | 974651 - 976168 | 56299.8 |
| abi family protein | DWV56_04855 | Not Available | Negative | 976884 - 977996 | 43708.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
