Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase | DWV56_04705 | Not Available | Positive | 942599 - 943558 | 37395.4 |
| metallophosphoesterase | DWV56_04710 | Not Available | Positive | 943568 - 944035 | 17854.1 |
| udp-n-acetylglucosamine pyrophosphorylase | DWV56_04715 | Not Available | Positive | 944051 - 944725 | 24829.7 |
| penicillin-binding protein | DWV56_04720 | Not Available | Positive | 944778 - 945479 | 26512.5 |
| hypothetical protein | DWV56_04725 | Not Available | Positive | 945594 - 945890 | 11606.9 |
| duf4065 domain-containing protein | DWV56_04730 | Not Available | Positive | 945998 - 946999 | 38544.7 |
| rpn family recombination-promoting nuclease/putative transposase | DWV56_04735 | Not Available | Positive | 947324 - 948232 | 35694.0 |
| Trna-leu | Not Available | Not Available | Positive | 948304 - 948390 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 948413 - 948499 | Not Available |
| trna 2-thiouridine(34) synthase mnma | DWV56_04750 | Not Available | Positive | 948578 - 949738 | 43894.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
