Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWV56_04655 | Not Available | Negative | 930910 - 931494 | 22441.5 |
| tnpv protein | DWV56_04660 | Not Available | Negative | 931550 - 931705 | 6098.1 |
| aarf/abc1/ubib kinase family protein | DWV56_04665 | Not Available | Positive | 932025 - 933620 | 60710.7 |
| signal peptidase ii | DWV56_04670 | Not Available | Positive | 933635 - 934129 | 18612.0 |
| rlua family pseudouridine synthase | DWV56_04675 | Not Available | Positive | 934111 - 935025 | 34560.6 |
| cytidine deaminase | DWV56_04680 | Not Available | Positive | 935022 - 935504 | 18142.7 |
| diguanylate cyclase | DWV56_04685 | Not Available | Positive | 935570 - 937495 | 75153.3 |
| ribonuclease hiii | DWV56_04690 | Not Available | Negative | 937492 - 938340 | 32014.6 |
| endonuclease muts2 | DWV56_04695 | Not Available | Positive | 938392 - 940716 | 87023.1 |
| excinuclease abc subunit uvrc | DWV56_04700 | Not Available | Positive | 940725 - 942482 | 68132.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
