Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Holdemanella biformis strain AF10-31
Accession NumberQSAT00000000.1
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | DWV56_00400 | Not Available | + | 72315 - 73052 | 28266.7 |
| fad-binding protein | DWV56_00405 | Not Available | - | 73057 - 74988 | 69654.0 |
| aminotransferase class v-fold plp-dependent enzyme | DWV56_00410 | Not Available | - | 75077 - 76405 | 49050.2 |
| thioether cross-link-forming sciff peptide maturase | DWV56_00415 | Not Available | - | 76386 - 77780 | 52613.7 |
| six-cysteine peptide sciff | DWV56_00420 | Not Available | - | 77862 - 78014 | 5297.15 |
| hypothetical protein | DWV56_00425 | Not Available | - | 78108 - 80492 | 85005.7 |
| antibiotic abc transporter permease | DWV56_00430 | Not Available | - | 80495 - 82576 | 76955.2 |
| tetr/acrr family transcriptional regulator | DWV56_00435 | Not Available | + | 82751 - 83371 | 23824.7 |
| sodium:calcium antiporter | DWV56_00440 | Not Available | - | 83379 - 84296 | 32355.1 |
| hypothetical protein | DWV56_00445 | Not Available | - | 84440 - 85321 | 34573.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.