Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DWV56_04485 | Not Available | Positive | 897270 - 898484 | 46923.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DWV56_04490 | Not Available | Positive | 898570 - 900318 | 64604.5 |
| duf2975 domain-containing protein | DWV56_04500 | Not Available | Positive | 900711 - 901307 | 23122.1 |
| transcriptional regulator | DWV56_04505 | Not Available | Positive | 901310 - 901531 | 8188.15 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | DWV56_04510 | Not Available | Positive | 901639 - 901935 | 11067.2 |
| type ii toxin-antitoxin system rele/pare family toxin | DWV56_04515 | Not Available | Positive | 901937 - 902239 | 11778.3 |
| abc transporter permease | DWV56_04520 | Not Available | Negative | 902345 - 904318 | 77756.1 |
| abc transporter atp-binding protein | DWV56_04525 | Not Available | Negative | 904315 - 904956 | 23602.9 |
| hypothetical protein | DWV56_04530 | Not Available | Negative | 905039 - 906193 | 45392.3 |
| dna-binding response regulator | DWV56_04535 | Not Available | Negative | 906190 - 906864 | 26363.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
