Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate--protein phosphotransferase | DWV56_04225 | Not Available | Positive | 848411 - 850114 | 62170.5 |
| abc transporter atp-binding protein | DWV56_04230 | Not Available | Positive | 850164 - 851903 | 65346.8 |
| abc transporter atp-binding protein | DWV56_04235 | Not Available | Positive | 851890 - 853647 | 66181.5 |
| n-acetylmuramoyl-l-alanine amidase | DWV56_04240 | Not Available | Negative | 853656 - 854246 | 22016.8 |
| resolvase | DWV56_04245 | Not Available | Negative | 854256 - 855884 | 63839.3 |
| helix-turn-helix domain-containing protein | DWV56_04255 | Not Available | Negative | 856508 - 856753 | 9521.67 |
| sigma-70 family rna polymerase sigma factor | DWV56_04260 | Not Available | Negative | 856756 - 857175 | 16676.1 |
| hypothetical protein | DWV56_04265 | Not Available | Negative | 857454 - 857678 | 8214.97 |
| transcriptional regulator | DWV56_04270 | Not Available | Negative | 857689 - 857895 | 7691.52 |
| hypothetical protein | DWV56_04275 | Not Available | Negative | 857895 - 858209 | 11879.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
