Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyroglutamyl-peptidase i | DWV56_03820 | Not Available | Positive | 769419 - 770066 | 23587.2 |
| oligoendopeptidase f | DWV56_03825 | Not Available | Positive | 770146 - 771924 | 68621.9 |
| abc transporter substrate-binding protein | DWV56_03830 | Not Available | Positive | 772002 - 773696 | 62653.2 |
| abc transporter substrate-binding protein | DWV56_03835 | Not Available | Positive | 774228 - 775058 | 30168.7 |
| amino acid abc transporter permease | DWV56_03840 | Not Available | Positive | 775061 - 775783 | 26793.3 |
| amino acid abc transporter atp-binding protein | DWV56_03845 | Not Available | Positive | 775794 - 776531 | 27575.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | DWV56_03850 | Not Available | Positive | 776635 - 778173 | 56761.9 |
| dna-binding response regulator | DWV56_03855 | Not Available | Positive | 778260 - 778946 | 26376.0 |
| sensor histidine kinase | DWV56_03860 | Not Available | Positive | 778936 - 780333 | 53786.1 |
| hypothetical protein | DWV56_03865 | Not Available | Negative | 780330 - 781346 | 40236.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
