Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase | DWV56_03570 | Not Available | Positive | 720322 - 721197 | 34362.4 |
| 30s ribosomal protein s2 | DWV56_03575 | Not Available | Positive | 721342 - 722247 | 34210.1 |
| elongation factor ts | DWV56_03580 | Not Available | Positive | 722272 - 723162 | 32396.9 |
| ump kinase | DWV56_03585 | Not Available | Positive | 723266 - 723976 | 25862.6 |
| ribosome recycling factor | DWV56_03590 | Not Available | Positive | 723988 - 724533 | 20418.5 |
| isoprenyl transferase | DWV56_03595 | Not Available | Positive | 724526 - 725266 | 28111.0 |
| phosphatidate cytidylyltransferase | DWV56_03600 | Not Available | Positive | 725263 - 726030 | 28327.6 |
| rip metalloprotease rsep | DWV56_03605 | Not Available | Positive | 726042 - 727115 | 40077.4 |
| hemolysin iii family protein | DWV56_03610 | Not Available | Negative | 727155 - 727811 | 25057.0 |
| chromosome segregation protein smc | DWV56_03615 | Not Available | Positive | 727920 - 730847 | 110830.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
