Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription antiterminator | DWV56_03520 | Not Available | Positive | 708157 - 710181 | 77927.6 |
| deoxyribose-phosphate aldolase | DWV56_03525 | Not Available | Positive | 710191 - 710844 | 23998.7 |
| mate family efflux transporter | DWV56_03530 | Not Available | Positive | 710936 - 712270 | 48712.8 |
| mate family efflux transporter | DWV56_03535 | Not Available | Positive | 712231 - 713604 | 50534.6 |
| crp/fnr family transcriptional regulator | DWV56_03540 | Not Available | Negative | 713625 - 714281 | 25360.7 |
| duf3284 domain-containing protein | DWV56_03545 | Not Available | Negative | 714696 - 715127 | 16733.3 |
| tatd family deoxyribonuclease | DWV56_03550 | Not Available | Positive | 715180 - 715929 | 29126.2 |
| dna-protecting protein dpra | DWV56_03555 | Not Available | Positive | 716112 - 716843 | 27646.5 |
| type i dna topoisomerase | DWV56_03560 | Not Available | Positive | 716899 - 719031 | 81221.1 |
| methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfo | DWV56_03565 | Not Available | Positive | 719031 - 720329 | 48442.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
