Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor n(5)-glutamine methyltransferase | DWV56_03470 | Not Available | Negative | 698284 - 699132 | 31870.8 |
| peptide chain release factor 1 | DWV56_03475 | Not Available | Negative | 699132 - 700208 | 40943.4 |
| hypothetical protein | DWV56_03480 | Not Available | Positive | 700374 - 701768 | 53515.6 |
| hypothetical protein | DWV56_03485 | Not Available | Positive | 702135 - 702905 | 30151.6 |
| alpha-ketoacid dehydrogenase subunit beta | DWV56_03490 | Not Available | Negative | 703171 - 704127 | 35183.0 |
| transketolase | DWV56_03495 | Not Available | Negative | 704120 - 704968 | 31446.5 |
| pts sugar transporter subunit iib | DWV56_03500 | Not Available | Negative | 705030 - 705308 | 9933.27 |
| pts ascorbate transporter subunit iic | DWV56_03505 | Not Available | Negative | 705332 - 706744 | 49865.3 |
| pts sugar transporter subunit iia | DWV56_03510 | Not Available | Negative | 706772 - 707218 | 16657.9 |
| hypothetical protein | DWV56_03515 | Not Available | Positive | 707508 - 708146 | 24967.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
