Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding transcriptional accessory protein | DWV56_03420 | Not Available | Negative | 689473 - 691620 | 80667.8 |
| atp-binding protein | DWV56_03425 | Not Available | Negative | 691673 - 693007 | 51303.8 |
| hypothetical protein | DWV56_03430 | Not Available | Positive | 693169 - 693306 | 5469.59 |
| lyttr family transcriptional regulator | DWV56_03435 | Not Available | Positive | 693410 - 693844 | 17101.3 |
| hypothetical protein | DWV56_03440 | Not Available | Positive | 693841 - 694509 | 25239.6 |
| toxin-antitoxin system hicb family antitoxin | DWV56_03445 | Not Available | Negative | 694519 - 694893 | 14370.2 |
| type ii toxin-antitoxin system hica family toxin | DWV56_03450 | Not Available | Negative | 694838 - 695134 | 11576.2 |
| mate family efflux transporter | DWV56_03455 | Not Available | Negative | 695269 - 696627 | 49310.1 |
| methionyl aminopeptidase | DWV56_03460 | Not Available | Negative | 696655 - 697521 | 31856.1 |
| nadh peroxidase | DWV56_03465 | Not Available | Negative | 697617 - 698186 | 21211.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
