Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DWV56_03115 | Not Available | Negative | 624610 - 626088 | 57293.2 |
| nad-dependent epimerase/dehydratase family protein | DWV56_03120 | Not Available | Negative | 626120 - 627157 | 39050.2 |
| duf4435 domain-containing protein | DWV56_03125 | Not Available | Negative | 627191 - 628876 | 66236.7 |
| nad-dependent epimerase/dehydratase family protein | DWV56_03135 | Not Available | Negative | 630578 - 631771 | 44804.2 |
| udp-n-acetyl glucosamine 2-epimerase | DWV56_03140 | Not Available | Negative | 631822 - 633015 | 45056.3 |
| nad-dependent epimerase/dehydratase family protein | DWV56_03145 | Not Available | Negative | 633031 - 634065 | 38427.4 |
| sugar isomerase | DWV56_03150 | Not Available | Negative | 634062 - 635561 | 56919.7 |
| hypothetical protein | DWV56_03155 | Not Available | Negative | 635558 - 635770 | 8340.71 |
| o-antigen ligase domain-containing protein | DWV56_03160 | Not Available | Negative | 635767 - 636957 | 45892.2 |
| glycosyltransferase family 4 protein | DWV56_03165 | Not Available | Negative | 636918 - 638000 | 41072.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
