Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin groel | DWV56_02585 | Not Available | Positive | 531748 - 533361 | 58037.6 |
| branched-chain amino acid abc transporter substrate-binding protein | DWV56_02590 | Not Available | Positive | 533544 - 534716 | 41255.4 |
| branched-chain amino acid abc transporter permease | DWV56_02595 | Not Available | Positive | 534767 - 535645 | 31370.9 |
| branched-chain amino acid abc transporter permease | DWV56_02600 | Not Available | Positive | 535649 - 536605 | 34028.4 |
| abc transporter atp-binding protein | DWV56_02605 | Not Available | Positive | 536602 - 537381 | 29253.1 |
| abc transporter atp-binding protein | DWV56_02610 | Not Available | Positive | 537389 - 538093 | 25538.6 |
| cbs domain-containing protein | DWV56_02615 | Not Available | Positive | 538098 - 538748 | 23945.2 |
| l-serine ammonia-lyase | DWV56_02620 | Not Available | Negative | 538785 - 539993 | 43676.9 |
| acetyltransferase | DWV56_02625 | Not Available | Positive | 540142 - 541917 | 67528.8 |
| hypothetical protein | DWV56_02630 | Not Available | Negative | 541934 - 542641 | 25909.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
