Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Holdemanella biformis strain AF10-31
Accession NumberQSAT00000000.1
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pts system mannose/fructose/sorbose family transporter subunit iid | DWV56_00205 | Not Available | - | 36786 - 37661 | 31897.6 |
| pts sugar transporter subunit iic | DWV56_00210 | Not Available | - | 37651 - 38442 | 27067.9 |
| pts n-acetylgalactosamine transporter subunit iib | DWV56_00215 | Not Available | - | 38466 - 38942 | 17411.2 |
| m20 family peptidase | DWV56_00220 | Not Available | - | 39181 - 40347 | 41706.6 |
| pts fructose transporter subunit iia | DWV56_00225 | Not Available | - | 40445 - 40876 | 15204.0 |
| sis domain-containing protein | DWV56_00230 | Not Available | - | 40900 - 42078 | 43737.6 |
| aldose 1-epimerase family protein | DWV56_00235 | Not Available | - | 42218 - 43069 | 33248.9 |
| cof-type had-iib family hydrolase | DWV56_00240 | Not Available | - | 43093 - 43851 | 29133.0 |
| patatin family protein | DWV56_00245 | Not Available | - | 44066 - 44911 | 31875.5 |
| nadp-dependent malic enzyme | DWV56_00250 | Not Available | - | 44904 - 46067 | 40825.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.