Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii fructose-1,6-bisphosphate aldolase | DWV56_02385 | Not Available | Positive | 491213 - 492082 | 30577.5 |
| s9 family peptidase | DWV56_02390 | Not Available | Positive | 492145 - 493998 | 70710.9 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DWV56_02395 | Not Available | Positive | 494089 - 495357 | 46151.3 |
| mate family efflux transporter | DWV56_02400 | Not Available | Positive | 495359 - 496768 | 51032.2 |
| hypothetical protein | DWV56_02405 | Not Available | Negative | 496798 - 497022 | 8242.58 |
| duf3955 domain-containing protein | DWV56_02410 | Not Available | Positive | 497150 - 497371 | 8220.44 |
| diguanylate cyclase | DWV56_02415 | Not Available | Positive | 497429 - 500503 | 118312.0 |
| xre family transcriptional regulator | DWV56_02420 | Not Available | Positive | 500627 - 501586 | 35708.0 |
| mfs transporter | DWV56_02425 | Not Available | Negative | 501617 - 502852 | 45659.9 |
| 2-hydroxyglutaryl-coa dehydratase | DWV56_02430 | Not Available | Positive | 503053 - 505983 | 109518.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
