Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| suf system nifu family fe-s cluster assembly protein | DWV56_02080 | Not Available | Positive | 420157 - 420603 | 16941.0 |
| fe-s cluster assembly protein sufb | DWV56_02085 | Not Available | Positive | 420596 - 421999 | 52914.4 |
| 5-formyltetrahydrofolate cyclo-ligase | DWV56_02090 | Not Available | Positive | 421983 - 422489 | 19444.6 |
| hypothetical protein | DWV56_02095 | Not Available | Positive | 422486 - 423106 | 23401.8 |
| hypothetical protein | DWV56_02100 | Not Available | Positive | 423123 - 424166 | 40783.7 |
| hd domain-containing protein | DWV56_02105 | Not Available | Negative | 424163 - 424633 | 17859.4 |
| cold-shock protein | DWV56_02110 | Not Available | Negative | 424692 - 424904 | 7684.73 |
| leucine-rich repeat domain-containing protein | DWV56_02115 | Not Available | Positive | 425123 - 426565 | 55501.3 |
| hypothetical protein | DWV56_02120 | Not Available | Negative | 426963 - 427166 | 7593.32 |
| is110 family transposase | DWV56_02130 | Not Available | Negative | 427945 - 429129 | 44714.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
