Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lantibiotic immunity abc transporter mute/epie family permease subunit | DWV56_01665 | Not Available | Negative | 339484 - 340215 | 27643.3 |
| atp-binding cassette domain-containing protein | DWV56_01670 | Not Available | Negative | 340208 - 340921 | 26120.2 |
| site-specific integrase | DWV56_01680 | Not Available | Negative | 342088 - 343317 | 47933.3 |
| helix-turn-helix domain-containing protein | DWV56_01685 | Not Available | Negative | 343327 - 343608 | 10947.2 |
| helix-turn-helix domain-containing protein | DWV56_01690 | Not Available | Negative | 343574 - 343801 | 9069.05 |
| helix-turn-helix domain-containing protein | DWV56_01695 | Not Available | Negative | 343901 - 344107 | 7941.65 |
| type ii toxin-antitoxin system pemk/mazf family toxin | DWV56_01700 | Not Available | Negative | 344094 - 344660 | 21839.2 |
| sigma-70 family rna polymerase sigma factor | DWV56_01705 | Not Available | Negative | 344766 - 345353 | 22994.4 |
| hypothetical protein | DWV56_01710 | Not Available | Negative | 345665 - 345913 | 9718.99 |
| imma/irre family metallo-endopeptidase | DWV56_01715 | Not Available | Negative | 345910 - 346635 | 27483.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
