Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii intron reverse transcriptase/maturase | DWV56_01615 | Not Available | Negative | 327236 - 328534 | 50421.0 |
| diguanylate cyclase | DWV56_01620 | Not Available | Negative | 329095 - 330864 | 67191.7 |
| serine dehydratase subunit alpha family protein | DWV56_01625 | Not Available | Positive | 330960 - 332192 | 44352.8 |
| hypothetical protein | DWV56_01630 | Not Available | Negative | 332206 - 332823 | 25038.2 |
| hypothetical protein | DWV56_01635 | Not Available | Negative | 333051 - 334703 | 64382.8 |
| helix-turn-helix domain-containing protein | DWV56_01640 | Not Available | Negative | 335131 - 335898 | 29353.8 |
| hypothetical protein | DWV56_01645 | Not Available | Negative | 336217 - 336507 | 10893.7 |
| sensor histidine kinase | DWV56_01650 | Not Available | Negative | 336701 - 338077 | 51863.3 |
| dna-binding response regulator | DWV56_01655 | Not Available | Negative | 338065 - 338727 | 25324.0 |
| lantibiotic immunity abc transporter mutg family permease subunit | DWV56_01660 | Not Available | Negative | 338742 - 339482 | 27387.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
