Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | DWV56_01565 | Not Available | Positive | 315893 - 317176 | 47718.7 |
| class a beta-lactamase-related serine hydrolase | DWV56_01570 | Not Available | Positive | 317221 - 318984 | 66719.4 |
| merr family transcriptional regulator | DWV56_01575 | Not Available | Negative | 318971 - 319762 | 31658.9 |
| mate family efflux transporter | DWV56_01580 | Not Available | Positive | 319819 - 321111 | 48021.3 |
| aquaporin family protein | DWV56_01585 | Not Available | Negative | 321159 - 321869 | 25582.8 |
| nickel-dependent lactate racemase | DWV56_01590 | Not Available | Negative | 321888 - 323165 | 46482.0 |
| crp/fnr family transcriptional regulator | DWV56_01595 | Not Available | Positive | 323302 - 323958 | 25484.0 |
| ecf transporter s component | DWV56_01600 | Not Available | Positive | 324014 - 324556 | 19577.6 |
| hypothetical protein | DWV56_01605 | Not Available | Negative | 324611 - 324988 | 14764.2 |
| response regulator | DWV56_01610 | Not Available | Negative | 324969 - 327158 | 82780.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
