Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i 3-dehydroquinate dehydratase | DWV56_01515 | Not Available | Negative | 305739 - 306500 | 27738.6 |
| c4-dicarboxylate abc transporter | DWV56_01520 | Not Available | Negative | 306505 - 307524 | 38642.9 |
| trap transporter large permease | DWV56_01525 | Not Available | Negative | 307534 - 308826 | 45940.7 |
| trap transporter small permease | DWV56_01530 | Not Available | Negative | 308826 - 309350 | 20531.9 |
| mfs transporter | DWV56_01535 | Not Available | Negative | 309419 - 310624 | 42447.0 |
| shikimate dehydrogenase | DWV56_01540 | Not Available | Negative | 310654 - 311526 | 31712.3 |
| fad-dependent oxidoreductase | DWV56_01545 | Not Available | Negative | 311550 - 313547 | 73435.4 |
| lysr family transcriptional regulator | DWV56_01550 | Not Available | Positive | 313685 - 314572 | 34260.3 |
| hypothetical protein | DWV56_01555 | Not Available | Negative | 314926 - 315189 | 10253.0 |
| duf3784 domain-containing protein | DWV56_01560 | Not Available | Negative | 315296 - 315625 | 12589.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
