Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWV56_01345 | Not Available | Positive | 272177 - 273079 | 34022.9 |
| transposase | DWV56_01365 | Not Available | Positive | 278302 - 278595 | 11057.1 |
| is3 family transposase | DWV56_01370 | Not Available | Positive | 278592 - 279470 | 34341.2 |
| hypothetical protein | DWV56_01375 | Not Available | Negative | 279474 - 279659 | 7356.83 |
| mannose-6-phosphate isomerase | DWV56_01385 | Not Available | Negative | 280481 - 282205 | 67390.7 |
| glucose-6-phosphate isomerase | DWV56_01390 | Not Available | Negative | 282202 - 282738 | 20285.9 |
| atp-binding protein | DWV56_01395 | Not Available | Negative | 283210 - 284415 | 47331.3 |
| hypothetical protein | DWV56_01400 | Not Available | Negative | 284667 - 285071 | 16147.8 |
| atp-dependent helicase | DWV56_01405 | Not Available | Negative | 285860 - 287287 | 54125.1 |
| hypothetical protein | DWV56_01410 | Not Available | Positive | 287366 - 287731 | 14326.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
