Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii intron reverse transcriptase/maturase | DWV56_12525 | Not Available | Positive | 2495452 - 2496717 | 50427.4 |
| duf1893 domain-containing protein | DWV56_12530 | Not Available | Negative | 2496935 - 2497348 | 15701.1 |
| aldo/keto reductase | DWV56_12535 | Not Available | Negative | 2497332 - 2498435 | 42421.1 |
| hypothetical protein | DWV56_12545 | Not Available | Positive | 2500221 - 2501784 | 56350.5 |
| xre family transcriptional regulator | DWV56_12550 | Not Available | Positive | 2502314 - 2503222 | 35215.9 |
| transposase | DWV56_12555 | Not Available | Negative | 2503223 - 2503980 | 29277.7 |
| site-specific integrase | DWV56_12560 | Not Available | Negative | 2503980 - 2504618 | 24757.2 |
| integrase | DWV56_12565 | Not Available | Negative | 2504700 - 2505695 | 38529.4 |
| xre family transcriptional regulator | DWV56_12570 | Not Available | Positive | 2506177 - 2507085 | 35568.5 |
| d-amino acid aminotransferase | DWV56_12575 | Not Available | Positive | 2507189 - 2508046 | 32838.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
