Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yggs family pyridoxal phosphate-dependent enzyme | DWV56_01145 | Not Available | Negative | 226559 - 227176 | 23594.4 |
| duf2798 domain-containing protein | DWV56_01150 | Not Available | Negative | 227244 - 227696 | 17666.6 |
| ghkl domain-containing protein | DWV56_01155 | Not Available | Negative | 227829 - 229658 | 71995.9 |
| dna-binding response regulator | DWV56_01160 | Not Available | Negative | 229651 - 230352 | 26788.2 |
| pig-l family deacetylase | DWV56_01165 | Not Available | Negative | 230371 - 231051 | 26495.5 |
| hypothetical protein | DWV56_01170 | Not Available | Positive | 231157 - 233451 | 88399.4 |
| gtra family protein | DWV56_01175 | Not Available | Positive | 233427 - 233828 | 15617.6 |
| glycosyltransferase | DWV56_01180 | Not Available | Positive | 233815 - 234735 | 35070.0 |
| alpha-l-fucosidase | DWV56_01185 | Not Available | Negative | 234732 - 236024 | 50526.0 |
| sos response-associated peptidase | DWV56_01190 | Not Available | Negative | 235984 - 236475 | 18808.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
