Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | DWV56_12050 | Not Available | Positive | 2406012 - 2407532 | 58661.6 |
| hypothetical protein | DWV56_12055 | Not Available | Positive | 2407687 - 2408772 | 41055.8 |
| hypothetical protein | DWV56_12060 | Not Available | Positive | 2408907 - 2412107 | 120066.0 |
| duf2871 family protein | DWV56_12065 | Not Available | Positive | 2412380 - 2412475 | 3584.38 |
| hypothetical protein | DWV56_12070 | Not Available | Negative | 2412615 - 2412863 | 9408.38 |
| hypothetical protein | DWV56_12075 | Not Available | Positive | 2412947 - 2413153 | 7780.12 |
| dna polymerase iii subunit delta | DWV56_12080 | Not Available | Positive | 2413249 - 2414190 | 36262.3 |
| hypothetical protein | DWV56_12085 | Not Available | Positive | 2414264 - 2414464 | 7452.33 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | DWV56_12090 | Not Available | Negative | 2414935 - 2415207 | 10150.3 |
| 30s ribosomal protein s20 | DWV56_12095 | Not Available | Negative | 2415393 - 2415656 | 9425.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
