Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator spx | DWV56_11900 | Not Available | Positive | 2380614 - 2381054 | 16555.0 |
| hypothetical protein | DWV56_11905 | Not Available | Positive | 2381167 - 2382966 | 69141.7 |
| xre family transcriptional regulator | DWV56_11910 | Not Available | Positive | 2383276 - 2384472 | 47120.4 |
| duf3789 domain-containing protein | DWV56_11915 | Not Available | Positive | 2384485 - 2384619 | 4914.21 |
| hypothetical protein | DWV56_11920 | Not Available | Positive | 2384620 - 2384841 | 7993.14 |
| cpbp family intramembrane metalloprotease | DWV56_11925 | Not Available | Positive | 2384922 - 2385647 | 27736.5 |
| conjugal transfer protein | DWV56_11930 | Not Available | Positive | 2385752 - 2386048 | 11902.2 |
| antirestriction protein | DWV56_11935 | Not Available | Positive | 2385967 - 2386470 | 19640.1 |
| antirestriction protein arda | DWV56_11940 | Not Available | Positive | 2386488 - 2386991 | 19525.6 |
| conjugal transfer protein | DWV56_11945 | Not Available | Positive | 2387100 - 2387498 | 15302.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
