Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DWV56_11850 | Not Available | Positive | 2369098 - 2372337 | 121255.0 |
| pyruvate kinase | DWV56_11855 | Not Available | Negative | 2372389 - 2373801 | 51778.6 |
| 6-phosphofructokinase | DWV56_11860 | Not Available | Negative | 2373829 - 2374791 | 34579.0 |
| hypothetical protein | DWV56_11865 | Not Available | Positive | 2375163 - 2375513 | 13612.7 |
| 50s ribosomal protein l28 | DWV56_11870 | Not Available | Negative | 2375585 - 2375776 | 7029.75 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DWV56_11875 | Not Available | Positive | 2375923 - 2376903 | 36372.3 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DWV56_11880 | Not Available | Positive | 2376905 - 2378227 | 50297.9 |
| undecaprenyl-diphosphate phosphatase | DWV56_11885 | Not Available | Positive | 2378224 - 2379039 | 30501.7 |
| php domain-containing protein | DWV56_11890 | Not Available | Positive | 2379049 - 2379942 | 33824.0 |
| hd domain-containing protein | DWV56_11895 | Not Available | Negative | 2379952 - 2380509 | 21222.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
