Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(38-40) synthase trua | DWV56_11790 | Not Available | Positive | 2361100 - 2361843 | 28284.9 |
| php domain-containing protein | DWV56_11795 | Not Available | Positive | 2361830 - 2362654 | 32356.5 |
| 50s ribosomal protein l13 | DWV56_11800 | Not Available | Positive | 2362772 - 2363209 | 16290.6 |
| 30s ribosomal protein s9 | DWV56_11805 | Not Available | Positive | 2363223 - 2363624 | 14835.1 |
| para family protein | DWV56_11820 | Not Available | Positive | 2364103 - 2364924 | 29568.2 |
| parb/repb/spo0j family partition protein | DWV56_11825 | Not Available | Positive | 2364881 - 2365816 | 35759.8 |
| duf2397 family protein | DWV56_11830 | Not Available | Negative | 2365894 - 2366517 | 25147.0 |
| degv family protein | DWV56_11835 | Not Available | Negative | 2366581 - 2367438 | 31677.6 |
| degv family protein | DWV56_11840 | Not Available | Negative | 2367441 - 2368301 | 31497.2 |
| abc transporter atp-binding protein | DWV56_11845 | Not Available | Positive | 2368392 - 2369096 | 26159.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
