Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWV56_11360 | Not Available | Positive | 2282425 - 2282715 | 11316.4 |
| duf4860 domain-containing protein | DWV56_11365 | Not Available | Positive | 2282712 - 2283155 | 16977.6 |
| hypothetical protein | DWV56_11370 | Not Available | Positive | 2283152 - 2283475 | 13127.8 |
| hypothetical protein | DWV56_11375 | Not Available | Positive | 2283472 - 2283765 | 11198.9 |
| pilt/pilu family type 4a pilus atpase | DWV56_11380 | Not Available | Positive | 2283767 - 2284822 | 39742.0 |
| mate family efflux transporter | DWV56_11385 | Not Available | Positive | 2284912 - 2286255 | 48736.2 |
| hypothetical protein | DWV56_11390 | Not Available | Positive | 2286252 - 2286761 | 19868.1 |
| manganese efflux pump | DWV56_11395 | Not Available | Negative | 2286769 - 2287332 | 20559.8 |
| histidine phosphatase family protein | DWV56_11400 | Not Available | Positive | 2287553 - 2288164 | 23027.6 |
| duf1275 domain-containing protein | DWV56_11405 | Not Available | Negative | 2288130 - 2288801 | 25051.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
