Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stp1/irep family pp2c-type ser/thr phosphatase | DWV56_10605 | Not Available | Negative | 2124037 - 2124777 | 27471.5 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | DWV56_10610 | Not Available | Negative | 2124782 - 2125825 | 39897.0 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | DWV56_10615 | Not Available | Negative | 2125857 - 2127050 | 46110.6 |
| primosomal protein n' | DWV56_10620 | Not Available | Negative | 2127052 - 2129145 | 80590.0 |
| type ii toxin-antitoxin system rele/pare family toxin | DWV56_10625 | Not Available | Negative | 2129394 - 2129705 | 12403.3 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | DWV56_10630 | Not Available | Negative | 2129695 - 2129955 | 9990.14 |
| hypothetical protein | DWV56_10635 | Not Available | Positive | 2130285 - 2130584 | 11515.8 |
| hypothetical protein | DWV56_10640 | Not Available | Positive | 2130550 - 2130873 | 12396.0 |
| duf4145 domain-containing protein | DWV56_10645 | Not Available | Positive | 2131007 - 2134300 | 127327.0 |
| hypothetical protein | DWV56_10650 | Not Available | Positive | 2134610 - 2134834 | 8641.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
