Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF10-31 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
820351 bp
Thymine Count
835766 bp
Guanine Count
430183 bp
Cytosine Count
431129 bp
Genome Length
2518124 bp
Protein-coding Genes
2385 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | DWV56_10555 | Not Available | Negative | 2114386 - 2115267 | 32993.1 |
| carbohydrate abc transporter substrate-binding protein | DWV56_10560 | Not Available | Negative | 2115343 - 2116671 | 48479.3 |
| arac family transcriptional regulator | DWV56_10565 | Not Available | Positive | 2116854 - 2117690 | 32509.9 |
| hypothetical protein | DWV56_10570 | Not Available | Positive | 2117703 - 2117888 | 7228.56 |
| ggdef domain-containing protein | DWV56_10575 | Not Available | Negative | 2117908 - 2118987 | 41520.3 |
| hypothetical protein | DWV56_10580 | Not Available | Negative | 2118988 - 2120256 | 49081.3 |
| thiamine diphosphokinase | DWV56_10585 | Not Available | Negative | 2120260 - 2120853 | 22516.3 |
| ribulose-phosphate 3-epimerase | DWV56_10590 | Not Available | Negative | 2120856 - 2121515 | 24258.4 |
| ribosome small subunit-dependent gtpase a | DWV56_10595 | Not Available | Negative | 2121512 - 2122375 | 32424.1 |
| stk1 family pasta domain-containing ser/thr kinase | DWV56_10600 | Not Available | Negative | 2122368 - 2124053 | 62509.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
